Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX567864: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319781' containing sample 'VET0810S'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.8M spots, 760.6M bases, 342.4Mb downloads

UUID: 0356931b-420f-4003-b320-c6579109a59b

Design: Illumina sequencing of Staphylococcus aureus VET0810S via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228857 • SRP042909 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0810S

SAMN02404347 • SRS627018 • All experiments • All runs

Organism: Staphylococcus aureus VET0810S

Library:

Name: Pond-319781

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470835.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDHP

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55264

research_project: RP-513

root_sample_id: SM-4POA7

sample_id: SM-5CDHP

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.8M spots, 760.6M bases, 342.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1330249	1,903,970	384.6M	172.9Mb	2014-06-03
SRR1346366	1,861,593	376M	169.6Mb	2014-06-06

ID:: 810681

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