Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX566076: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319799' containing sample 'VET1850R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.4M spots, 897.5M bases, 404.8Mb downloads

UUID: 1aceb83c-cb76-45b3-a1a8-69d685dfa6c7

Design: Illumina sequencing of Staphylococcus aureus VET1850R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228799 • SRP042692 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1850R

SAMN02404289 • SRS626332 • All experiments • All runs

Organism: Staphylococcus aureus VET1850R

Library:

Name: Pond-319799

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470853.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDI8

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55219

research_project: RP-513

root_sample_id: SM-4PO8H

sample_id: SM-5CDI8

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.4M spots, 897.5M bases, 404.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1326958	2,245,704	453.6M	204.3Mb	2014-06-03
SRR1344765	2,197,339	443.9M	200.5Mb	2014-06-06

ID:: 808893

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