Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX547966: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318437' containing sample 'VET0469R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.5M spots, 913.8M bases, 421Mb downloads

UUID: b0ce3b9a-9927-4a1e-91be-948f5a168ba1

Design: Illumina sequencing of Staphylococcus aureus VET0469R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228773 • SRP045023 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0469R

SAMN02404263 • SRS616225 • All experiments • All runs

Organism: Staphylococcus aureus VET0469R

Library:

Name: Pond-318437

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470166.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8WT

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55200

research_project: RP-513

root_sample_id: SM-4PO7Q

sample_id: SM-5C8WT

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.5M spots, 913.8M bases, 421Mb

Run	# of Spots	# of Bases	Size	Published
SRR1293384	2,267,178	458M	210.8Mb	2014-05-21
SRR1531013	2,256,594	455.8M	210.1Mb	2014-07-28

ID:: 784924

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