Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX507326: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318420' containing sample 'VET0444R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.5M spots, 712M bases, 331.6Mb downloads

UUID: 9f1bb807-5660-4c91-bba9-205fd8fe4e75

Design: Illumina sequencing of Staphylococcus aureus VET0444R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228758 • SRP045011 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0444R

SAMN02404248 • SRS586278 • All experiments • All runs

Organism: Staphylococcus aureus VET0444R

Library:

Name: Pond-318420

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470149.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8VU

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55186

research_project: RP-513

root_sample_id: SM-4PMWE

sample_id: SM-5C8VU

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.5M spots, 712M bases, 331.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1213114	1,768,900	357.3M	166.3Mb	2014-04-02
SRR1530997	1,755,653	354.6M	165.3Mb	2014-07-28

ID:: 706630

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