Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX507219: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318429' containing sample 'VET0359R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.6M spots, 721.2M bases, 332.2Mb downloads

UUID: c3ac84c5-e4c7-4fe9-b550-7342fcde3c4f

Design: Illumina sequencing of Staphylococcus aureus VET0359R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228699 • SRP045007 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0359R

SAMN02404191 • SRS586185 • All experiments • All runs

Organism: Staphylococcus aureus VET0359R

Library:

Name: Pond-318429

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470158.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8WD

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55131

research_project: RP-513

root_sample_id: SM-4PMUQ

sample_id: SM-5C8WD

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.6M spots, 721.2M bases, 332.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1212982	1,790,841	361.7M	166.6Mb	2014-04-02
SRR1530998	1,779,219	359.4M	165.7Mb	2014-07-28

ID:: 706523

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