Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX499237: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318704' containing sample 'VET0293R'
4 ILLUMINA (Illumina HiSeq 2000) runs: 13.8M spots, 2.8G bases, 1.3Gb downloads

UUID: f7fe95f0-d2cb-428a-8e2f-8d7fb5b456dc

Design: Illumina sequencing of Staphylococcus aureus VET0293R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228651 • SRP040511 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0293R

SAMN02404143 • SRS580765 • All experiments • All runs

Organism: Staphylococcus aureus VET0293R

Library:

Name: Pond-318704

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471465.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CLE8

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55373

research_project: RP-513

root_sample_id: SM-4Q5PJ

sample_id: SM-5CLE8

work_request: 39368

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 4 runs, 13.8M spots, 2.8G bases, 1.3Gb

Run	# of Spots	# of Bases	Size	Published
SRR1202660	3,460,088	698.9M	344.5Mb	2014-03-24
SRR1202695	3,486,631	704.3M	345.7Mb	2014-03-24
SRR1202703	3,458,407	698.6M	346.8Mb	2014-03-24
SRR1202736	3,430,345	692.9M	340.7Mb	2014-03-24

ID:: 689334

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