Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX565733: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318301' containing sample 'VET0112R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.5M spots, 1.1G bases, 550.3Mb downloads

UUID: cbe0d6f2-568d-4754-b39f-8468c6c76400

Design: Illumina sequencing of Staphylococcus aureus VET0112R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228531 • SRP042661 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0112R

SAMN02404023 • SRS626236 • All experiments • All runs

Organism: Staphylococcus aureus VET0112R

Library:

Name: Pond-318301

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 469934.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8OH

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55065

research_project: RP-513

root_sample_id: SM-4P939

sample_id: SM-5C8OH

work_request: 39365

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-09 14:32:02.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.5M spots, 1.1G bases, 550.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1326199	2,783,457	562.3M	279.4Mb	2014-06-03
SRR1344700	2,723,048	550.1M	270.8Mb	2014-06-06

ID:: 808550

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