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SRX534283: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Typhimurium str. VA_WGS-00215 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.2M spots, 562.7M bases, 291.2Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)
Study: GenomeTrakr Project: Virginia - Division of Consolidated Laboratory Services
PRJNA219491 • SRP033708 • All experiments • All runs
show Abstracthide Abstract
GenomeTrakr Project: Virginia - Division of Consolidated Laboratory Services (VA-DCLS)
Sample: Pathogen sample from Salmonella enterica
SAMN02403436 • SRS603009 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Typhimurium
Library:
Name: Salmonella enterica str. VA_WGS-00215 shotgun
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Typhimurium str. VA_WGS-00215.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.42
Runs: 1 run, 1.2M spots, 562.7M bases, 291.2Mb
Run# of Spots# of BasesSizePublished
SRR12729041,217,897562.7M291.2Mb2014-05-06

ID:
743296

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