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SRX476707: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Agona str. VA_WGS-00127 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 996,696 spots, 472.8M bases, 292.7Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)
Study: GenomeTrakr Project: Virginia - Division of Consolidated Laboratory Services
PRJNA219491 • SRP033708 • All experiments • All runs
show Abstracthide Abstract
GenomeTrakr Project: Virginia - Division of Consolidated Laboratory Services (VA-DCLS)
Sample: Pathogen sample from Salmonella enterica
SAMN02403348 • SRS562426 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Agona
Library:
Name: Salmonella enterica str. VA_WGS-00127 shotgun
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Agona str. VA_WGS-00127.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.42
Runs: 1 run, 996,696 spots, 472.8M bases, 292.7Mb
Run# of Spots# of BasesSizePublished
SRR1177603996,696472.8M292.7Mb2014-02-26

ID:
665786

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