U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX483719: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Typhimurium str. VA_WGS-00117 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 872,280 spots, 416.1M bases, 242.7Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FSIS SRCAMB
Study: GenomeTrakr Project: Virginia - Division of Consolidated Laboratory Services
PRJNA219491 • SRP033708 • All experiments • All runs
show Abstracthide Abstract
GenomeTrakr Project: Virginia - Division of Consolidated Laboratory Services (VA-DCLS)
Sample: Pathogen sample from Salmonella enterica
SAMN02403338 • SRS568034 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Typhimurium
Library:
Name: Salmonella enterica str. VA_WGS-00117 shotgun
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Typhimurium str. VA_WGS-00117.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.42
Runs: 1 run, 872,280 spots, 416.1M bases, 242.7Mb
Run# of Spots# of BasesSizePublished
SRR1186357872,280416.1M242.7Mb2014-03-10

ID:
673792

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...