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SRX476399: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Typhimurium str. VA_WGS-00107 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 843,192 spots, 399.9M bases, 240.9Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)
Study: GenomeTrakr Project: Virginia - Division of Consolidated Laboratory Services
PRJNA219491 • SRP033708 • All experiments • All runs
show Abstracthide Abstract
GenomeTrakr Project: Virginia - Division of Consolidated Laboratory Services (VA-DCLS)
Sample: Pathogen sample from Salmonella enterica
SAMN02403328 • SRS562171 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Typhimurium
Library:
Name: Salmonella enterica str. VA_WGS-00107 shotgun
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Typhimurium str. VA_WGS-00107.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.42
Runs: 1 run, 843,192 spots, 399.9M bases, 240.9Mb
Run# of Spots# of BasesSizePublished
SRR1177211843,192399.9M240.9Mb2014-02-26

ID:
665478

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