Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioSample

SRX468101: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315405' containing sample 'Staphylococcus aureus M13074'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.6M spots, 1.1G bases, 562.4Mb downloads

UUID: e06545c0-f1da-4496-b2bc-38b0645f598c

Design: Illumina sequencing of Staphylococcus aureus M13074 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227605 • SRP037263 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M13074

SAMN02402529 • SRS555616 • All experiments • All runs

Organism: Staphylococcus aureus M13074

Library:

Name: Pond-315405

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 462714.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5ASTY

material_type: DNA:DNA Somatic

product_order: PDO-2503

product_part_number: P-WG-0004

project: G54011

research_project: RP-509

root_sample_id: SM-4T28B

sample_id: SM-5ASTY

work_request: 39229

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 03:36:50.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.6M spots, 1.1G bases, 562.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1165761	2,800,858	565.8M	282.6Mb	2014-02-09
SRR1167398	2,784,013	562.4M	279.9Mb	2014-02-11

ID:: 648289

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioSample

Supplemental Content

Related information

Recent activity