Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX468116: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315428' containing sample 'Staphylococcus aureus F71576'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.4M spots, 1.1G bases, 522Mb downloads

UUID: c71f9aec-630d-498c-9bb5-3d5b9b7d8e43

Design: Illumina sequencing of Staphylococcus aureus F71576 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227583 • SRP037278 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F71576

SAMN02402507 • SRS555631 • All experiments • All runs

Organism: Staphylococcus aureus F71576

Library:

Name: Pond-315428

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 462737.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5ASUM

material_type: DNA:DNA Somatic

product_order: PDO-2503

product_part_number: P-WG-0004

project: G54060

research_project: RP-509

root_sample_id: SM-4T29S

sample_id: SM-5ASUM

work_request: 39229

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 03:36:50.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.4M spots, 1.1G bases, 522Mb

Run	# of Spots	# of Bases	Size	Published
SRR1165776	2,685,060	542.4M	262.3Mb	2014-02-09
SRR1167422	2,669,861	539.3M	259.7Mb	2014-02-11

ID:: 648304

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