Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioSample

SRX507400: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-311226' containing sample '2011-60-2275-1'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.3M spots, 656.6M bases, 318.4Mb downloads

UUID: 5bcc2811-08b6-4060-a459-7b49268fa113

Design: Illumina sequencing of Staphylococcus aureus 2011-60-2275-1 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus 2011-60-2275-1

SAMN02391348 • SRS586346 • All experiments • All runs

Organism: Staphylococcus aureus 2011-60-2275-1

Library:

Name: Pond-311226

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445639.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571SX

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51695

research_project: RP-513

root_sample_id: SM-4PAJ4

sample_id: SM-571SX

work_request: 39110

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-17 10:49:08.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.3M spots, 656.6M bases, 318.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1213187	3,250,620	656.6M	318.4Mb	2014-04-02

ID:: 706704

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioSample

Supplemental Content

Related information

Recent activity