Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX555821: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315259' containing sample 'C5453'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.7M spots, 543.2M bases, 248.1Mb downloads

UUID: c6afbfc3-577b-4e6b-a4c5-c5f0444f3748

Design: Illumina sequencing of Staphylococcus aureus C5453 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226434 • SRP042534 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus C5453

SAMN02391307 • SRS622904 • All experiments • All runs

Organism: Staphylococcus aureus C5453

Library:

Name: Pond-315259

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445770.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571WO

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51826

research_project: RP-513

root_sample_id: SM-4Q7FU

sample_id: SM-571WO

work_request: 39112

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 03:36:50.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.7M spots, 543.2M bases, 248.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303532	2,688,957	543.2M	248.1Mb	2014-05-30

ID:: 794849

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