Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX392208: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-295461' containing sample 'Staphylococcus aureus W58473'
1 ILLUMINA (Illumina HiSeq 2000) run: 4.6M spots, 934.7M bases, 455.5Mb downloads

UUID: 08637fee-af04-4305-8436-0d1a906a5e6b

Design: Illumina sequencing of Staphylococcus aureus W58473 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224677 • SRP034280 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus W58473

SAMN02384142 • SRS515382 • All experiments • All runs

Organism: Staphylococcus aureus W58473

Library:

Name: Pond-295461

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 435309.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:543J1

material_type: DNA:DNA Somatic

product_order: PDO-2359

product_part_number: P-WG-0004

project: G51073

research_project: RP-509

root_sample_id: SM-4T3FV

sample_id: SM-543J1

work_request: 38946

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-02 16:38:07.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 4.6M spots, 934.7M bases, 455.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1050072	4,627,008	934.7M	455.5Mb	2013-12-15

ID:: 563055

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