Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX422786: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-293477' containing sample 'Staphylococcus aureus F83269'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.1M spots, 1G bases, 537.3Mb downloads

UUID: fde30f67-63ce-4cdb-9934-5dc5f3142843

Design: Illumina sequencing of Staphylococcus aureus F83269 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224483 • SRP034986 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F83269

SAMN02383772 • SRS526839 • All experiments • All runs

Organism: Staphylococcus aureus F83269

Library:

Name: Pond-293477

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 433159.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:53J7G

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50668

research_project: RP-509

root_sample_id: SM-4T4LV

sample_id: SM-53J7G

work_request: 38889

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-11 07:33:15.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.1M spots, 1G bases, 537.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1103383	2,516,719	508.4M	265.4Mb	2014-01-07
SRR1103507	2,575,773	520.3M	272Mb	2014-01-07

ID:: 598260

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