Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX391539: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-291709' containing sample 'Staphylococcus aureus H24884'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.9M spots, 1.2G bases, 638.7Mb downloads

UUID: 4a126ec6-9435-4a65-aac7-5d30499573c1

Design: Illumina sequencing of Staphylococcus aureus H24884 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224432 • SRP033916 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus H24884

SAMN02383721 • SRS514773 • All experiments • All runs

Organism: Staphylococcus aureus H24884

Library:

Name: Pond-291709

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 427777.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:52PKB

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50619

research_project: RP-509

root_sample_id: SM-4T4KF

sample_id: SM-52PKB

work_request: 38888

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-29 16:10:35.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.9M spots, 1.2G bases, 638.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1049198	2,948,297	595.6M	320.7Mb	2013-12-13
SRR1049199	2,920,856	590M	318Mb	2013-12-13

ID:: 562293

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