Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioSample

SRX373495: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-283007' containing sample 'Staphylococcus aureus M1548'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.2M spots, 638.3M bases, 286.9Mb downloads

UUID: 27c4a0d5-dd12-497a-908d-bb3478a9ee7d

Design: Illumina sequencing of Staphylococcus aureus M1548 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA221467 • SRP032631 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1548

SAMN02364060 • SRS498856 • All experiments • All runs

Organism: Staphylococcus aureus M1548

Library:

Name: Pond-283007

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 409535.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WOUV

material_type: DNA:DNA Somatic

product_order: PDO-2176

product_part_number: P-WG-0004

project: G48752

research_project: RP-433

root_sample_id: SM-4D1O9

sample_id: SM-4WOUV

work_request: 38404

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-28 13:16:48.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.2M spots, 638.3M bases, 286.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1025160	1,574,817	318.1M	143.1Mb	2013-11-05
SRR1025161	1,585,126	320.2M	143.8Mb	2013-11-05

ID:: 533708

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioSample

Supplemental Content

Related information

Recent activity