Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX373447: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-282948' containing sample 'Staphylococcus aureus M1483'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.3M spots, 862.5M bases, 388.4Mb downloads

UUID: 326a27dc-c6e4-4c00-bb1d-6892b39b37c2

Design: Illumina sequencing of Staphylococcus aureus M1483 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA221413 • SRP032586 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1483

SAMN02364006 • SRS498809 • All experiments • All runs

Organism: Staphylococcus aureus M1483

Library:

Name: Pond-282948

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 409476.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WOT7

material_type: DNA:DNA Somatic

product_order: PDO-2176

product_part_number: P-WG-0004

project: G48703

research_project: RP-433

root_sample_id: SM-4D1MP

sample_id: SM-4WOT7

work_request: 38404

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-28 13:16:48.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.3M spots, 862.5M bases, 388.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1025062	2,144,628	433.2M	194.9Mb	2013-11-05
SRR1025063	2,125,145	429.3M	193.4Mb	2013-11-05

ID:: 533660

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