Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX368083: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-281073' containing sample 'Staphylococcus aureus M1331'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.3M spots, 464.9M bases, 202.6Mb downloads

UUID: acfafa5f-d0f6-4062-b860-0f02c8f1c113

Design: Illumina sequencing of Staphylococcus aureus M1331 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA220159 • SRP032074 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1331

SAMN02360966 • SRS494125 • All experiments • All runs

Organism: Staphylococcus aureus M1331

Library:

Name: Pond-281073

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 407637.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WB2H

material_type: DNA:DNA Somatic

product_order: PDO-2122

product_part_number: P-WG-0004

project: G48471

research_project: RP-433

root_sample_id: SM-4CQPP

sample_id: SM-4WB2H

work_request: 38310

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.3M spots, 464.9M bases, 202.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017304	2,301,262	464.9M	202.6Mb	2013-10-25

ID:: 526714

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