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DRX207580: Illumina HiSeq 2500 paired end sequencing of SAMD00211629
1 ILLUMINA (Illumina HiSeq 2500) run: 3.3M spots, 985.7M bases, 533.5Mb downloads

Submitted by: SHIZUOKA
Study: Genomic analyses of self-transmissible plasmids obtained by exogenous plasmid capturing from environmental samples
PRJDB9503 • DRP007933 • All experiments • All runs
show Abstracthide Abstract
Plasmids are mobile genetic elements to transmit various genes among different bacteria. However, it is still unclear which and how plasmid(s) spread these genes in natural environment. The objective of this study is to identify which conjugative plasmids are spread in natural environments. We successfully isolated >700 of self-transmissible plasmids from various natural environmental samples in Japan by exogenous plasmid capturing. Their nucleotide sequences are determined by NGSs.
Sample: CA10(pSN1216-29)
SAMD00211629 • DRS211729 • All experiments • All runs
Organism: Metapseudomonas resinovorans
Library:
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: NEBNext UltraII FS DNA Library Prep Kit
Spot descriptor:
1  forward152  reverse

Runs: 1 run, 3.3M spots, 985.7M bases, 533.5Mb
Run# of Spots# of BasesSizePublished
DRR2172453,263,784985.7M533.5Mb2021-12-01

ID:
18144027

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