Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioSample

SRX368086: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279911' containing sample 'Staphylococcus aureus M1369'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.8M spots, 771.3M bases, 341.5Mb downloads

UUID: 1940e639-a854-47cb-adec-38040abb6f5a

Design: Illumina sequencing of Staphylococcus aureus M1369 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA218373 • SRP032077 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1369

SAMN02350553 • SRS494128 • All experiments • All runs

Organism: Staphylococcus aureus M1369

Library:

Name: Pond-279911

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 402363.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4VJNC

material_type: DNA:DNA Somatic

product_order: PDO-2038

product_part_number: P-WG-0004

project: G47837

research_project: RP-433

root_sample_id: SM-4CW7X

sample_id: SM-4VJNC

work_request: 38135

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.8M spots, 771.3M bases, 341.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017310	1,908,870	385.6M	170.5Mb	2013-10-25
SRR1017311	1,909,324	385.7M	171Mb	2013-10-25

ID:: 526717

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioSample

Supplemental Content

Related information

Recent activity