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SRX13244649: GSM5706460: invivo_day10_Fp_PEB0191 [D10_7]; Frischella perrara; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 48.7M spots, 6.1G bases, 2.4Gb downloads

Submitted by: NCBI (GEO)
Study: RNA sequencing of Frischella perrara
PRJNA784285 • SRP348273 • All experiments • All runs
show Abstracthide Abstract
RNA sequencing of Frischella perrara PEB0191 during in vitro growth and gut colonization Overall design: In vitro experiment: RNA sequencing of Frischella perrara PEB0191 wild type and ihfA* mutant after 16h of growth on modified TYG agar. In vivo experiment: RNA sequencing of Frischella perrara PEB0191 during gut colonization. Sampling after 5 days and 10 days post-inoculation. RNA sequencing of Frischella perrara PEB0191 after 16h of growth on modified TYG agar was used as reference condition.
Sample: invivo_day10_Fp_PEB0191 [D10_7]
SAMN23481788 • SRS11168068 • All experiments • All runs
Organism: Frischella perrara
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Trizol-based RNA extraction RiboZero rRNA depletion followed by Illumina Truseq library preparation. In vivo samples were depleted of eukaryotic mRNA usig polyA-depletion
Experiment attributes:
GEO Accession: GSM5706460
Links:
Runs: 1 run, 48.7M spots, 6.1G bases, 2.4Gb
Run# of Spots# of BasesSizePublished
SRR1705572048,670,3286.1G2.4Gb2021-12-01

ID:
18121898

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