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SRX13244646: GSM5706457: invivo_day5_Fp_PEB0194 [D5_10]; Frischella perrara; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 44.6M spots, 5.6G bases, 2.2Gb downloads

Submitted by: NCBI (GEO)
Study: RNA sequencing of Frischella perrara
PRJNA784285 • SRP348273 • All experiments • All runs
show Abstracthide Abstract
RNA sequencing of Frischella perrara PEB0191 during in vitro growth and gut colonization Overall design: In vitro experiment: RNA sequencing of Frischella perrara PEB0191 wild type and ihfA* mutant after 16h of growth on modified TYG agar. In vivo experiment: RNA sequencing of Frischella perrara PEB0191 during gut colonization. Sampling after 5 days and 10 days post-inoculation. RNA sequencing of Frischella perrara PEB0191 after 16h of growth on modified TYG agar was used as reference condition.
Sample: invivo_day5_Fp_PEB0194 [D5_10]
SAMN23481785 • SRS11168065 • All experiments • All runs
Organism: Frischella perrara
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Trizol-based RNA extraction RiboZero rRNA depletion followed by Illumina Truseq library preparation. In vivo samples were depleted of eukaryotic mRNA usig polyA-depletion
Experiment attributes:
GEO Accession: GSM5706457
Links:
Runs: 1 run, 44.6M spots, 5.6G bases, 2.2Gb
Run# of Spots# of BasesSizePublished
SRR1705571744,631,5405.6G2.2Gb2021-12-01

ID:
18121895

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