Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX364559: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-278605' containing sample 'Staphylococcus aureus M1028'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.5M spots, 909.9M bases, 432.3Mb downloads

UUID: 55df6558-7eb5-463f-a0e0-6f6a6a83821c

Design: Illumina sequencing of Staphylococcus aureus M1028 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA217127 • SRP031404 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1028

SAMN02334651 • SRS490976 • All experiments • All runs

Organism: Staphylococcus aureus M1028

Library:

Name: Pond-278605

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396177.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWLM

material_type: DNA:DNA Somatic

product_order: PDO-1932

product_part_number: P-WG-0004

project: G46190

research_project: RP-433

root_sample_id: SM-4C5FI

sample_id: SM-4UWLM

work_request: 37965

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 03:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.5M spots, 909.9M bases, 432.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1012171	2,255,122	455.5M	216.6Mb	2013-10-16
SRR1012172	2,249,199	454.3M	215.7Mb	2013-10-16

ID:: 521377

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