Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioSample

SRX363656: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-277944' containing sample 'Staphylococcus aureus M0945'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.1M spots, 830.8M bases, 399.5Mb downloads

UUID: 3709afb6-4618-470b-baed-5e07c2de03a0

Design: Illumina sequencing of Staphylococcus aureus M0945 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216882 • SRP030930 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0945

SAMN02325833 • SRS490285 • All experiments • All runs

Organism: Staphylococcus aureus M0945

Library:

Name: Pond-277944

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 394093.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4T87Z

material_type: DNA:DNA Somatic

product_order: PDO-1930

product_part_number: P-WG-0004

project: G46131

research_project: RP-433

root_sample_id: SM-4C9N4

sample_id: SM-4T87Z

work_request: 37963

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 16:23:41.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.1M spots, 830.8M bases, 399.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1010783	2,080,203	420.2M	201.8Mb	2013-10-09
SRR1010784	2,032,754	410.6M	197.6Mb	2013-10-09

ID:: 516093

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioSample

Supplemental Content

Related information

Recent activity