Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioSample

SRX363521: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-277830' containing sample 'Staphylococcus aureus M0647'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.9M spots, 593.6M bases, 281.8Mb downloads

UUID: a265ec98-0b1f-42e8-855a-e4a9e7b730d1

Design: Illumina sequencing of Staphylococcus aureus M0647 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216601 • SRP030796 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0647

SAMN02325554 • SRS490151 • All experiments • All runs

Organism: Staphylococcus aureus M0647

Library:

Name: Pond-277830

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 394445.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4T8FL

material_type: DNA:DNA Somatic

product_order: PDO-1801

product_part_number: P-WG-0004

project: G44631

research_project: RP-433

root_sample_id: SM-4C878

sample_id: SM-4T8FL

work_request: 37550

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 00:01:32.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.9M spots, 593.6M bases, 281.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1010509	1,481,360	299.2M	142.5Mb	2013-10-09
SRR1010510	1,457,089	294.3M	139.3Mb	2013-10-09

ID:: 515958

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioSample

Supplemental Content

Related information

Recent activity