Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioSample

SRX359284: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-271573' containing sample 'Staphylococcus aureus M0188'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.3M spots, 873.6M bases, 386.9Mb downloads

UUID: c7d0fce9-6749-4def-aa13-c25e7c599f24

Design: Illumina sequencing of Staphylococcus aureus M0188 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216294 • SRP030361 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0188

SAMN02325249 • SRS486945 • All experiments • All runs

Organism: Staphylococcus aureus M0188

Library:

Name: Pond-271573

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 384976.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHIH

material_type: DNA:DNA Somatic

product_order: PDO-1797

product_part_number: P-WG-0004

project: G44584

research_project: RP-433

root_sample_id: SM-4C5DC

sample_id: SM-4RHIH

work_request: 37546

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-16 20:54:12.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.3M spots, 873.6M bases, 386.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001769	2,153,332	435M	192.7Mb	2013-09-24
SRR1001770	2,171,305	438.6M	194.2Mb	2013-09-24

ID:: 507585

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioSample

Supplemental Content

Related information

Recent activity