Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX359227: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-273407' containing sample 'Staphylococcus aureus M0117'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.3M spots, 1.1G bases, 512.7Mb downloads

UUID: 84b0b148-c7a4-4408-b34d-b55a94e42733

Design: Illumina sequencing of Staphylococcus aureus M0117 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216238 • SRP030305 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0117

SAMN02325193 • SRS486888 • All experiments • All runs

Organism: Staphylococcus aureus M0117

Library:

Name: Pond-273407

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385181.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHEK

material_type: DNA:DNA Somatic

product_order: PDO-1796

product_part_number: P-WG-0004

project: G44958

research_project: RP-433

root_sample_id: SM-4CY6P

sample_id: SM-4RHEK

work_request: 37545

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-17 15:33:01.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.3M spots, 1.1G bases, 512.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001652	2,649,492	535.2M	253.7Mb	2013-09-24
SRR1001653	2,697,153	544.8M	259Mb	2013-09-24

ID:: 507528

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