Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX359190: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-273449' containing sample 'Staphylococcus aureus M0067'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.2M spots, 1.1G bases, 515.6Mb downloads

UUID: 1d70b07b-aac6-450e-9d7e-346ab4cd53e5

Design: Illumina sequencing of Staphylococcus aureus M0067 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216202 • SRP030268 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0067

SAMN02325157 • SRS486851 • All experiments • All runs

Organism: Staphylococcus aureus M0067

Library:

Name: Pond-273449

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385219.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHFR

material_type: DNA:DNA Somatic

product_order: PDO-1796

product_part_number: P-WG-0004

project: G44922

research_project: RP-433

root_sample_id: SM-4CY5K

sample_id: SM-4RHFR

work_request: 37545

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-17 15:33:01.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.2M spots, 1.1G bases, 515.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001570	2,590,957	523.4M	255.2Mb	2013-09-24
SRR1001571	2,635,075	532.3M	260.3Mb	2013-09-24

ID:: 507491

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