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SRX8892909: WGS of Pundamilia nyererei
1 ILLUMINA (HiSeq X Ten) run: 188.5M spots, 56.6G bases, 21Gb downloads

Design: For library preparation, we used the Illumina TruSeq Nano HT Library preparation kit (Illumina Inc.) following the manufacturers guidelines. Samples were run on a Bioanalyser 12000 Chip to assure a high quality of DNA libraries and afterwards amplified using PCR. Finally, size distributions of all libraries were checked on a Bioanalyser HS chip before pooling them equimolarly. Sequencing was performed in paired-end mode (151PE) on a Hiseq X Ten platform (Illumina Inc.).
Submitted by: University of Konstanz
Study: Stripe pattern divergence in cichlid fish adaptive radiations
show Abstracthide Abstract
Convergent evolution of melanic horizontal stripes has been linked to a single locus harboring the gene agouti-related peptide 2 (agrp2). However, where and when the causal variants underlying this trait evolved and how they drove phenotypic divergence remained unknown. To test the alternative hypotheses of standing genetic variation versus de novo mutations (independently originating in each radiation), we searched for shared signals of genomic divergence at the agrp2 locus.
Sample: 171218_X591_FCHGWC7CCXY_L5_CKH-nyeM
SAMN15685499 • SRS7151934 • All experiments • All runs
Library:
Name: 171218_X591_FCHGWC7CCXY_L5_CKH-nyeM
Instrument: HiSeq X Ten
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 188.5M spots, 56.6G bases, 21Gb
Run# of Spots# of BasesSizePublished
SRR12394594188,520,80656.6G21Gb2020-08-05

ID:
11560881

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