U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX8926085: WGS sequence of Enterobacter hormaechei
1 ILLUMINA (NextSeq 500) run: 1.3M spots, 386.6M bases, 175.9Mb downloads

Design: DNA was extracted with a DNA Mini Kit (Qiagen). The libraries were prepared with a Nextera XT Kit (Illumina), and sequencing was performed with the NextSeq 500 system (Illumina), generating a mean of 149 base-pair end reads.
Submitted by: Institut Pasteur Guadeloupe
Study: High frequency of cephalosporinase over-producing Enterobacter cloacae complex in the environment in Guadeloupe (French West Indies)
show Abstracthide Abstract
Species belonging to Enterobacter cloacae complex (ECC) have been recovered for natural environment but are also involved in opportunistic infections in plants, animals and humans. Previous studies in Guadeloupe (French West Indies) have reported a high frequency of ECC strains resistant to third generation cephalosporins (3GC-R) in local anoles population but the distribution and the resistance background of ECC in humans and environment is limited. The aim of this study was to investigate and compare the distribution and antibiotic susceptibility pattern of the ECC species and subspecies isolated from different sources in a One Health Approach and to identify the possible explanations of this high level of resistance to 3GCs in non-clinical samples.
Library:
Name: GENC214
Instrument: NextSeq 500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.3M spots, 386.6M bases, 175.9Mb
Run# of Spots# of BasesSizePublished
SRR124302561,288,195386.6M175.9Mb2020-10-16

ID:
11602722

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...