WGS of Staphylococcus aureus: equids - SRA

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SRX11237108: WGS of Staphylococcus aureus: equids
1 ILLUMINA (Illumina MiSeq) run: 472,411 spots, 224M bases, 141.7Mb downloads

Design: Sequencing libraries were prepared using the Nextera XT library prep kit. The Qubit high sensitivity dsDNA assay and the Agilent TapeStation D1000 HS were used. All sample were normalized to 4 nM and pooled together for two independent runs and sequenced on the Illumina MiSeq 300 x 300 cycle v3 sequencing kit.

Submitted by: Texas A&M University

Study: Analysis of Virulence and Antimicrobial Resistance Gene Carriage in Staphylococcus aureus Infections in Equids

PRJNA604020 • SRP325749 • All experiments • All runs

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Seventy-two clinical Staphylococcus aureus isolates from equids (horses, donkeys, and a mule) were collected at Texas A&M University Veterinary Medical Teaching Hospital between 2007 and 2017. Whole genome sequencing was performed to characterize the isolates according to sequence typing, biofilm formation, antimicrobial resistance, and toxin carriage.

Sample:

SAMN13948080 • SRS9282914 • All experiments • All runs

Organism: Staphylococcus aureus

Library:

Name: 54-016

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 472,411 spots, 224M bases, 141.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR14923841	472,411	224M	141.7Mb	2021-07-30

ID:: 15005333

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