WGS of E. coli - SRA

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SRX7625040: WGS of E. coli
1 ILLUMINA (Illumina MiSeq) run: 1.3M spots, 460.6M bases, 286.8Mb downloads

Design: Sample libraries were prepared using the Nextera XT library preparation kit protocol. Sequencing was performed on the Illumina MiSeq platform using the MiSeq Reagent Kit V3 to produce 251 bp paired-end reads.

Submitted by: LETHBRIDGE RESEARCH CENTRE

Study: Escherichia coli and Shiga toxin-producing E. coli isolated in feces of Canadian feedlot cattle

PRJNA601484 • SRP243806 • All experiments • All runs

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The goals of this study are to evaluate the virulence, resistance and adhesion profile of strains isolated from feces of beef cattle in Alberta, Canada. Escherichia coli and Shiga toxin-producing E. coli isolated in feces of Canadian feedlot cattle

Sample:

SAMN13870031 • SRS6056933 • All experiments • All runs

Organism: Escherichia coli

Library:

Name: CAP29

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 1.3M spots, 460.6M bases, 286.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR10958915	1,262,820	460.6M	286.8Mb	2020-01-28

ID:: 9953688

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