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SRX6080478: C93C1
1 ILLUMINA (Illumina MiSeq) run: 574,482 spots, 276.8M bases, 149.3Mb downloads

Design: Nextera XT Library Prep Kit
Submitted by: NIH
Study: Salmonella enterica subsp. enterica Genome sequencing and assembly
show Abstracthide Abstract
Salmonella enterica (non-Typhi) is one of the most common food-borne pathogens, primarily originating in agricultural animals, which can enter the food chain and cause salmonellosis in humans. Importantly a small number of serovars of Salmonella are responsible for the majority of cases of human salmonellosis. Salmonella enterica serovars typically exhibit a limited range of animal hosts, often referred to as serovar-host specificity. Swine, cattle, and poultry each carry different strains of Salmonella and only certain strains cause infectious disease in these hosts, with the remaining strains carried in a subclinical status or in a commensal relationship. In recent years, the Centers for Disease Control and Prevention has reported a rise in human foodborne illnesses related to antibiotic resistant Salmonella enterica serovar I 4,[5], 12:i:- largely associated with the consumption of contaminated pork. Salmonella I 4,[5], 12:i:- is a serovar antigenically similar to Salmonella enterica serovar Typhimurium; however, it lacks the phase two flagellar antigen making it a monophasic variant.
Library:
Name: C93C1
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 574,482 spots, 276.8M bases, 149.3Mb
Run# of Spots# of BasesSizePublished
SRR9312857574,482276.8M149.3Mb2019-06-17

ID:
8131670

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