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SRX5085757: Carbapenem resistant Klebsiella aerogenes Genome sequencing and assembly
1 ILLUMINA (Illumina MiSeq) run: 1.3M spots, 802.1M bases, 484.7Mb downloads

Design: Nextera XT
Submitted by: University of Rochester
Study: Carbapenem resistant Klebsiella aerogenes at a tertiary care medical center Genome sequencing and assembly
show Abstracthide Abstract
Klebsiella aerogenes are significant nosocomial pathogens associated with outbreaks in intensive care units (ICUs). In 2017, a group of carbapenem-resistant Klebsiella aerogenes was cultured from patients in our cardiac ICU (CICU). Whole genome sequencing (WGS) of CR-EA isolates was undertaken to investigate patient-to-patient transmission, assess phylogeny relative to global strains, and characterize molecular determinants of resistance and virulence.
Sample:
SAMN10405418 • SRS4098166 • All experiments • All runs
Library:
Name: URMC205
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.3M spots, 802.1M bases, 484.7Mb
Run# of Spots# of BasesSizePublished
SRR82688391,332,342802.1M484.7Mb2018-12-14

ID:
6855723

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