U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioProject

SRX1056949: Whole genome shotgun sequencing of Colletotrichum incanum MAFF238704
1 ILLUMINA (Illumina HiSeq 2000) run: 71.5M spots, 14.3G bases, 9.1Gb downloads

Submitted by: Max Planck Institute for Plant breeding Research
Study: Colletotrichum incanum MAFF 238704 genome sequencing and assembly
show Abstracthide Abstract
In this study we sequenced the genome of the broad host range pathogen Colletotrichum incanum MAFF 238704 isolated from Raphanus sativus leaves in Japan. Through subsequent genome and transcriptome comparisons with a closely related mutualistic Colletotrichum species, we were searching for genomic signatures associated with the two different lifestyles (pathogenic vs. mutualistic) and investigating their evolutionary relationship.
Sample: MIGS Eukaryotic sample from Colletotrichum incanum MAFF 238704
SAMN03769590 • SRS959464 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
forward101  reverse

Runs: 1 run, 71.5M spots, 14.3G bases, 9.1Gb
Run# of Spots# of BasesSizePublished
SRR206099371,476,98014.3G9.1Gb2016-04-15

ID:
1533872

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...