Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX567931: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319800' containing sample 'VET1839R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.8M spots, 773.8M bases, 351Mb downloads

UUID: 4b9a9ece-f942-40bd-8d9e-de71986520cc

Design: Illumina sequencing of Staphylococcus aureus VET1839R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228791 • SRP042931 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1839R

SAMN02404281 • SRS627047 • All experiments • All runs

Organism: Staphylococcus aureus VET1839R

Library:

Name: Pond-319800

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470854.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDI9

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55212

research_project: RP-513

root_sample_id: SM-4PO89

sample_id: SM-5CDI9

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.8M spots, 773.8M bases, 351Mb

Run	# of Spots	# of Bases	Size	Published
SRR1330398	1,897,839	383.4M	174Mb	2014-06-04
SRR1330421	1,932,717	390.4M	177Mb	2014-06-04

ID:: 810783

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