Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX566793: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318689' containing sample 'VET0253R'
4 ILLUMINA (Illumina HiSeq 2000) runs: 15.3M spots, 3.1G bases, 1.5Gb downloads

UUID: ae3ee981-7ae2-4e26-809d-047e0ebc3bb8

Design: Illumina sequencing of Staphylococcus aureus VET0253R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228625 • SRP042739 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0253R

SAMN02404117 • SRS626668 • All experiments • All runs

Organism: Staphylococcus aureus VET0253R

Library:

Name: Pond-318689

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471450.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CLDS

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55348

research_project: RP-513

root_sample_id: SM-4Q5OS

sample_id: SM-5CLDS

work_request: 39368

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 4 runs, 15.3M spots, 3.1G bases, 1.5Gb

Run	# of Spots	# of Bases	Size	Published
SRR1328184	3,834,738	774.6M	391.1Mb	2014-06-03
SRR1342125	3,805,013	768.6M	384.9Mb	2014-06-05
SRR1342154	3,832,079	774.1M	388.6Mb	2014-06-05
SRR1342376	3,865,809	780.9M	390.5Mb	2014-06-05

ID:: 809610

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