Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX565715: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318290' containing sample 'VET0094R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.6M spots, 921.4M bases, 450.8Mb downloads

UUID: d4e924c3-b8fa-441d-bea0-2206e943d922

Design: Illumina sequencing of Staphylococcus aureus VET0094R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228517 • SRP042653 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0094R

SAMN02404010 • SRS626227 • All experiments • All runs

Organism: Staphylococcus aureus VET0094R

Library:

Name: Pond-318290

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 469923.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8NW

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55052

research_project: RP-513

root_sample_id: SM-4P92V

sample_id: SM-5C8NW

work_request: 39365

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-09 14:32:02.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.6M spots, 921.4M bases, 450.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1326140	2,255,661	455.6M	222.7Mb	2014-06-03
SRR1344694	2,305,592	465.7M	228.2Mb	2014-06-06

ID:: 808532

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