Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX555877: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-311271' containing sample '08139-6'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.7M spots, 538.8M bases, 254.5Mb downloads

UUID: 1fab847e-fe2a-4e3b-ba4e-1e6b288dbbb7

Design: Illumina sequencing of Staphylococcus aureus 08139-6 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226553 • SRP042569 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus 08139-6

SAMN02391425 • SRS622959 • All experiments • All runs

Organism: Staphylococcus aureus 08139-6

Library:

Name: Pond-311271

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445684.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571U8

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51760

research_project: RP-513

root_sample_id: SM-4PALD

sample_id: SM-571U8

work_request: 39110

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-17 10:49:08.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.7M spots, 538.8M bases, 254.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303572	2,667,442	538.8M	254.5Mb	2014-05-30

ID:: 794905

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