Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX546097: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-316135' containing sample '08-01728'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.4M spots, 486M bases, 217.3Mb downloads

UUID: 8c3cf9a5-618e-47d1-893c-7cb82e19d4fd

Design: Illumina sequencing of Staphylococcus aureus 08-01728 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus 08-01728

SAMN02391174 • SRS613163 • All experiments • All runs

Organism: Staphylococcus aureus 08-01728

Library:

Name: Pond-316135

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 464866.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5BIVP

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51873

research_project: RP-513

root_sample_id: SM-4Q85N

sample_id: SM-5BIVP

work_request: 39113

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-27 21:23:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.4M spots, 486M bases, 217.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1290874	2,406,169	486M	217.3Mb	2014-05-17

ID:: 781317

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