Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX375597: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-281262' containing sample 'Staphylococcus aureus M1208'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.8M spots, 1.2G bases, 553.8Mb downloads

UUID: da9a9021-6ba5-4194-8afd-0f53408d30da

Design: Illumina sequencing of Staphylococcus aureus M1208 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA220063 • SRP032911 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1208

SAMN02360870 • SRS501303 • All experiments • All runs

Organism: Staphylococcus aureus M1208

Library:

Name: Pond-281262

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 407669.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WBFU

material_type: DNA:DNA Somatic

product_order: PDO-2122

product_part_number: P-WG-0004

project: G48552

research_project: RP-433

root_sample_id: SM-4CVVQ

sample_id: SM-4WBFU

work_request: 38311

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-04 13:06:09.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.8M spots, 1.2G bases, 553.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1028138	2,934,504	592.8M	283.2Mb	2013-11-11
SRR1028139	2,831,291	571.9M	270.7Mb	2013-11-11

ID:: 537493

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