Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX368144: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279948' containing sample 'Staphylococcus aureus M1433'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.8M spots, 772.8M bases, 351.7Mb downloads

UUID: 320f5d23-f11c-4731-b6d3-9a7523d985c1

Design: Illumina sequencing of Staphylococcus aureus M1433 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA218424 • SRP032128 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1433

SAMN02350603 • SRS494185 • All experiments • All runs

Organism: Staphylococcus aureus M1433

Library:

Name: Pond-279948

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 402400.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4VJOE

material_type: DNA:DNA Somatic

product_order: PDO-2038

product_part_number: P-WG-0004

project: G47887

research_project: RP-433

root_sample_id: SM-4CW9K

sample_id: SM-4VJOE

work_request: 38135

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.8M spots, 772.8M bases, 351.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017411	1,911,667	386.2M	175.5Mb	2013-10-25
SRR1017412	1,913,976	386.6M	176.2Mb	2013-10-25

ID:: 526775

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