Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX364558: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-278594' containing sample 'Staphylococcus aureus M1027'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6.1M spots, 1.2G bases, 582.9Mb downloads

UUID: aff54fa6-ea1f-42fa-81a2-769abfa002da

Design: Illumina sequencing of Staphylococcus aureus M1027 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA217126 • SRP031403 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1027

SAMN02334650 • SRS490975 • All experiments • All runs

Organism: Staphylococcus aureus M1027

Library:

Name: Pond-278594

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396166.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWLB

material_type: DNA:DNA Somatic

product_order: PDO-1932

product_part_number: P-WG-0004

project: G46189

research_project: RP-433

root_sample_id: SM-4C5FH

sample_id: SM-4UWLB

work_request: 37965

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 03:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6.1M spots, 1.2G bases, 582.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1012169	3,054,754	617.1M	292Mb	2013-10-16
SRR1012170	3,047,421	615.6M	290.9Mb	2013-10-16

ID:: 521376

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