Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX367940: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279336' containing sample 'Staphylococcus aureus M0810'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.6M spots, 923.1M bases, 390.3Mb downloads

UUID: 5bd1c9b8-c018-4eb8-affd-bd7c1acc99c3

Design: Illumina sequencing of Staphylococcus aureus M0810 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216769 • SRP031949 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0810

SAMN02325720 • SRS493989 • All experiments • All runs

Organism: Staphylococcus aureus M0810

Library:

Name: Pond-279336

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396219.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWMT

material_type: DNA:DNA Somatic

product_order: PDO-1837

product_part_number: P-WG-0004

project: G45311

research_project: RP-433

root_sample_id: SM-4CXF4

sample_id: SM-4UWMT

work_request: 37670

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-11 17:00:05.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.6M spots, 923.1M bases, 390.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017087	2,284,245	461.4M	195.6Mb	2013-10-25
SRR1017088	2,285,679	461.7M	194.6Mb	2013-10-25

ID:: 526571

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