Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX367920: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279361' containing sample 'Staphylococcus aureus M0784'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.2M spots, 1.1G bases, 445.2Mb downloads

UUID: 397c8d57-d5c3-4937-928e-e794dc5be1a5

Design: Illumina sequencing of Staphylococcus aureus M0784 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216749 • SRP031929 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0784

SAMN02325700 • SRS493969 • All experiments • All runs

Organism: Staphylococcus aureus M0784

Library:

Name: Pond-279361

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396244.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWNJ

material_type: DNA:DNA Somatic

product_order: PDO-1837

product_part_number: P-WG-0004

project: G45291

research_project: RP-433

root_sample_id: SM-4CXEH

sample_id: SM-4UWNJ

work_request: 37670

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-11 17:00:05.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.2M spots, 1.1G bases, 445.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1016965	2,616,098	528.5M	221.9Mb	2013-10-25
SRR1016966	2,618,233	528.9M	223.3Mb	2013-10-25

ID:: 526551

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