Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX364366: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-275815' containing sample 'Staphylococcus aureus M0439'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.3M spots, 674.2M bases, 290.5Mb downloads

UUID: ca6f3fbb-8829-4715-b523-aeeb6c26d8b3

Design: Illumina sequencing of Staphylococcus aureus M0439 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216462 • SRP031213 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0439

SAMN02325416 • SRS490784 • All experiments • All runs

Organism: Staphylococcus aureus M0439

Library:

Name: Pond-275815

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385998.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RJSB

material_type: DNA:DNA Somatic

product_order: PDO-1799

product_part_number: P-WG-0004

project: G45009

research_project: RP-433

root_sample_id: SM-4CYJB

sample_id: SM-4RJSB

work_request: 37548

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-10 22:09:59.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.3M spots, 674.2M bases, 290.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1011875	1,673,606	338.1M	145.2Mb	2013-10-16
SRR1011876	1,664,081	336.1M	145.4Mb	2013-10-16

ID:: 521184

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