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SRX036767: Demonstration Project Reference Genome for Human Microbiome Project
1 ILLUMINA (Illumina Genome Analyzer II) run: 3M spots, 592.9M bases, 277.6Mb downloads

Design: Illumina sequencing of HMP Reference Genome for Escherichia coli MS 116-1 H_KT-116-1-0089515612 paired end RANDOM library
Submitted by: The Genome Center at Washington University School of Medicine in St. Louis (WUGSC)
Study: Demonstration Project Reference Genome for Human Microbiome Project
show Abstracthide Abstract
This strain is being sequenced as a reference for the Demonstration Project "Effect of Crohn's Disease Risk Alleles on Enteric Microbiota" of the Human Microbiome Project (HMP).
Sample: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli MS 116-1
SAMN00189165 • SRS150847 • All experiments • All runs
Library:
Name: 2853155853
Instrument: Illumina Genome Analyzer II
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
forward barcode
Group tagBasecalls
GGCTACGGCTAC
TAGCTTTAGCTT
CTTGTACTTGTA
CAGATCCAGATC
TTAGGCTTAGGC
CGATGTCGATGT
GCCAATGCCAAT
TGACCATGACCA
GATCAGGATCAG
ACTTGAACTTGA
ACAGTGACAGTG
ATCACGATCACG
107  reverse

Runs: 1 run, 3M spots, 592.9M bases, 277.6Mb
Run# of Spots# of BasesSizePublished
SRR0889062,964,272592.9M277.6Mb2011-01-29

ID:
43942

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